DisGeNET - a database of gene-disease associations

List of associated variants

Prostate carcinoma, C0600139

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs964184	ZPR1	0.716	0.440	11	116778201	3 prime UTR variant	G/C	snv		0.82	47
rs1290923018	ZNRD2 ; ZNRD2-AS1 ; FAM89B	0.851	0.160	11	65570699	missense variant	G/A	snv	4.0E-06		5
rs116890317	ZNF652	0.925	0.080	17	49321080	intron variant	T/A	snv		8.1E-03	2
rs79670217	ZNF652	0.925	0.080	17	49337732	intron variant	T/G	snv		3.7E-02	2
rs73046248	ZNF385D	1.000	0.080	3	21718112	intron variant	T/C	snv		3.3E-02	1
rs77911174	ZMIZ1-AS1 ; ZMIZ1	0.925	0.080	10	79067076	intron variant	A/G	snv		5.4E-02	2
rs6062509	ZGPAT	0.925	0.080	20	63731211	intron variant	G/T	snv		0.76	2
rs7064929	ZC3H12B	0.925	0.120	X	65147139	intergenic variant	G/A	snv		0.25	2
rs6763931	ZBTB38	0.925	0.080	3	141383991	intron variant	G/A	snv		0.54	4
rs145204276	ZBTB37 ; SNORD74 ; SNORD75 ; GAS5 ; SNORD77 ; SNORA103 ; SNORD76	0.658	0.320	1	173868254	splice donor variant	CAAGG/-	delins		8.8E-02	31
rs6869366	XRCC4 ; TMEM167A	0.701	0.280	5	83075927	intron variant	T/G	snv		9.2E-02	18
rs1805377	XRCC4	0.689	0.480	5	83353124	splice acceptor variant	G/A	snv	0.23	0.25	19
rs28360071	XRCC4	0.708	0.240	5	83142293	intron variant	GATGAGGAAACTAACTCTCAGTGGTGTTTA/-	delins		0.48	18
rs28360317	XRCC4	0.716	0.280	5	83323739	intron variant	-/CCT	delins		0.24	15
rs1799796	XRCC3 ; KLC1	0.790	0.240	14	103699590	intron variant	T/A;C	snv	0.31		7
rs3218536	XRCC2	0.620	0.440	7	152648922	missense variant	C/G;T	snv	4.0E-06; 6.4E-02		37
rs25487	XRCC1	0.441	0.800	19	43551574	missense variant	T/C	snv	0.68	0.71	205
rs1799782	XRCC1	0.474	0.800	19	43553422	missense variant	G/A	snv	9.5E-02	7.0E-02	151
rs25489	XRCC1	0.550	0.720	19	43552260	missense variant	C/G;T	snv	8.5E-06; 7.1E-02		78
rs25490	XRCC1	0.851	0.120	19	43552189	missense variant	T/C	snv	7.2E-03	2.6E-02	4
rs1041258260	XRCC1	0.925	0.080	19	43552170	missense variant	C/T	snv	8.0E-06	1.4E-05	2
rs777272152	XRCC1	0.925	0.080	19	43552176	missense variant	C/T	snv	1.2E-05	7.0E-06	2
rs1870134	XPC ; LSM3	0.827	0.120	3	14178523	missense variant	G/C;T	snv	4.2E-02; 8.1E-06		5
rs2228001	XPC	0.570	0.480	3	14145949	missense variant	G/T	snv	0.63	0.65	60
rs2807031	XAGE3	1.000	0.080	X	52867918	intron variant	T/C	snv		0.18	1